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Article |
Correspondence to Katerina Akassoglou: akass{at}ucsd.edu
Clearance of fibrin through proteolytic degradation is a critical step of matrix remodeling that contributes to tissue repair in a variety of pathological conditions, such as stroke, atherosclerosis, and pulmonary disease. However, the molecular mechanisms that regulate fibrin deposition are not known. Here, we report that the p75 neurotrophin receptor (p75NTR), a TNF receptor superfamily member up-regulated after tissue injury, blocks fibrinolysis by down-regulating the serine protease, tissue plasminogen activator (tPA), and up-regulating plasminogen activator inhibitor-1 (PAI-1). We have discovered a new mechanism in which phosphodiesterase PDE4A4/5 interacts with p75NTR to enhance cAMP degradation. The p75NTR-dependent down-regulation of cAMP results in a decrease in extracellular proteolytic activity. This mechanism is supported in vivo in p75NTR-deficient mice, which show increased proteolysis after sciatic nerve injury and lung fibrosis. Our results reveal a novel pathogenic mechanism by which p75NTR regulates degradation of cAMP and perpetuates scar formation after injury.
J. Zhang's present address is Department of Pharmacology and Molecular Sciences and Department of Neuroscience, The Johns Hopkins University School of Medicine, Baltimore, MD 21205.
Abbreviations used in this paper: 3D, three-dimensional; BDNF, brain-derived neurotrophic factor; CGN, cerebellar granule neuron; FL, full length; FRET, fluorescence resonance energy transfer; ICD, intracellular domain; IP, immunoprecipitation; LPS, lipopolysaccharide; MS, multiple sclerosis; NGF, nerve growth factor, p75NTR, p75 neurotrophin receptor; PA, plasminogen activator; PAI-1, plasminogen activator inhibitor-1; PDE, phosphodiesterase; PTX, pertussis toxin; SC, Schwann cell; tPA, tissue plasminogen activator; uPA, urokinase plasminogen activator; wt, wild-type.
| Introduction |
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In our current work, we focus on the mechanisms that regulate fibrinolysis after injury. Our previous studies demonstrated a correlation between fibrin deposition and expression of p75 neurotrophin receptor (p75NTR) after nerve injury (Akassoglou et al., 2002). Up-regulation of p75NTR is observed in MS (Dowling et al., 1999), stroke (Park et al., 2000), and spinal cord (Beattie et al., 2002) and sciatic nerve injury (Taniuchi et al., 1986), all of which are associated with fibrin deposition. p75NTR is also expressed in non-neuronal tissues (Lomen-Hoerth and Shooter, 1995) and is up-regulated in non-nervous system diseases associated with defects in fibrin degradation, such as atherosclerosis (Wang et al., 2000), melanoma formation (Herrmann et al., 1993), lung inflammation (Renz et al., 2004), and liver disease (Passino et al., 2007). p75NTR has been primarily characterized as a modulator of cell death (Wang et al., 2000) and differentiation (Passino et al., 2007) in non-neuronal tissues. The expression of p75NTR by cell types such as smooth muscle cells and hepatic stellate cells, which actively participate in tissue repair by migration, and secretion of ECM and extracellular proteases, raises the possibility for a functional role of p75NTR in disease pathogenesis that extends beyond apoptosis and differentiation.
We find that p75NTR is involved in the regulation of proteolytic activity and fibrin degradation. Mice deficient for p75NTR (Lee et al., 1992) show increased proteolytic activity and decreased fibrin deposition in two disease models: sciatic nerve injury and lung fibrosis. p75NTR regulates proteolytic activity by simultaneously down-regulating tPA and up-regulating PAI-1 via a novel cAMP/PKA pathway. p75NTR decreases cAMP via interaction with the cAMP-specific phosphodiesterase (PDE) isoform PDE4A4/5. This is of particular note, as selective PDE4 inhibitors have an anti-inflammatory action and have potential therapeutic utility in inflammatory lung disease, as well as in a wide range of neurologic diseases such as depression, spinal cord injury, MS, and stroke (Gretarsdottir et al., 2003; Nikulina et al., 2004; Houslay et al., 2005). Overall, the regulation of plasminogen activation by p75NTR identifies a novel pathogenic mechanism whereby p75NTR interacts with PDE4A4/5 to degrade cAMP and thus perpetuates scar formation that could possibly render the environment hostile for tissue repair.
| Results |
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Genetic loss of tPA rescues the effects of p75NTR deficiency
To examine genetically whether the increased proteolytic activity in the p75NTR–/– mice was due to tPA, we crossed p75NTR–/– mice with tPA–/– mice and generated p75NTR–/–tPA–/– double-knockout mice. p75NTR–/– mice show a decrease in fibrin deposition (Fig. 3 b) and an increase in proteolytic activity (Fig. 3 f), compared with wt control mice (Fig. 3, a and e, respectively). In contrast, p75NTR–/–tPA–/– mice show increased fibrin deposition (Fig. 3 c) when compared with p75NTR–/– mice (Fig. 3 b) and no evidence of proteolytic activity (Fig. 3 g).
As a control, tPA–/– mice also show no evidence of proteolytic activity after sciatic nerve crush injury (Fig. 3 h), as described previously (Akassoglou et al., 2000). Quantification of proteolytic activity is shown in Fig. 3 i. The evidence derived from the genetic depletion of tPA in the p75NTR–/– mice (p75NTR–/–tPA–/– mice, Fig. 3 g) are in accordance with the pharmacologic inhibition of tPA activity in the p75NTR–/– sciatic nerve using tPASTOP (Fig. 2 d). Overall, these results suggest that up-regulation of proteolytic activity in the sciatic nerve of p75NTR–/– mice is due to up-regulation of tPA.
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p75NTR regulates tPA and PAI-1 via a PDE4/cAMP/PKA pathway
Transcriptional regulation of tPA depends on the cAMP/PKA pathway (Medcalf et al., 1990). Indeed, elevation of cAMP, using dibutyryl-cAMP (db-cAMP), overcomes the inhibitory effect of p75NTR (Fig. 6 a). Moreover, cAMP elevation, elicited using the general PDE inhibitor IBMX, elevates tPA activity in NIH3T3p75NTR to the levels seen in NIH3T3 cells (Fig. 6 b). IBMX does not affect basal levels of tPA in NIH3T3 cells (Fig. 6 b). These data suggest that PDE activity is required for the p75NTR-induced tPA decrease.
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Similar to NIH3T3 cells, elevation of cAMP increases the activity of tPA in both wt and p75NTR–/– SCs (Fig. 6 f). Brain-derived neurotrophic factor (BDNF)/TrkB signaling has been shown to regulate tPA in primary cortical neurons (Fiumelli et al., 1999). In contrast to cortical neurons, SCs are known to express minute levels of TrkB but high levels of p75NTR (Cosgaya et al., 2002). We show here that treatment of SCs with either BDNF or nerve growth factor (NGF) has no effect on tPA (Fig. 6 f). Similar results are obtained after treatment of SCs with pro-NGF, the high-affinity ligand of p75NTR (Lee et al., 2001) (unpublished data). In addition, in NIH3T3 and NIH3T3p75NTR cells, which do not express Trk receptors, the p75NTR-mediated suppression of tPA activity occurs independent of neurotrophins or serum (unpublished data). In accordance, in NIH3T3 cells transient expression of the intracellular domain (ICD) of p75NTR decreases tPA similar to the full-length (FL) p75NTR (Fig. 6 g). These data suggest that neurotrophin/p75NTR signaling is not involved in the regulation of tPA in SCs and fibroblasts and that regulation of tPA by p75NTR is independent of neurotrophins.
p75NTR decreases cAMP via PDE4
Because the effects of p75NTR were overcome by elevating cAMP, we examined whether p75NTR reduced cAMP levels. Indeed, cAMP is decreased 7.8-fold in NIH3T3p75NTR cells (Fig. 7 a; P < 0.0001). Transient expression of p75NTR in NIH3T3 cells decreases levels of cAMP (Fig. 7 b; P < 0.0005).
Furthermore, siRNA knockdown against p75NTR leads to increased cAMP levels in both NIH3T3p75NTR cells (Fig. 7, c and e; P < 0.02) and primary SCs (Fig. 7, d and f; P < 0.03). NIH3T3 cells transiently transfected with p75NTR express fivefold less p75NTR than the stably transfected NIH3T3p75NTR cells (unpublished data). Differences in expression between stably and transiently transfected cells may account for the differences in the fold-decrease of cAMP and tPA between these two systems. Moreover, immunostaining with an antibody against cAMP shows increased cAMP in injured sciatic nerves from p75NTR–/– mice (Fig. 7, g and h). In neurons BDNF elevates cAMP exclusively via TrkB (Gao et al., 2003). In NIH3T3p75NTR cells, which do not express TrkB, stimulation with NGF or BDNF does not affect the p75NTR-mediated suppression of cAMP (Fig. S2). Similarly, inhibition of neurotrophins by Fc-p75NTR or BDNF by Fc-TrkB does not alter cAMP levels in NIH3T3p75NTR cells (Fig. S2, available at http://www.jcb.org/cgi/content/full/jcb.200701040/DC1). In accordance, transient expression of the ICD of p75NTR decreases cAMP similar to the FL p75NTR in NIH3T3 cells (Fig. 7 b). Overall, these data suggest a neurotrophin-independent PDE4/cAMP pathway downstream of p75NTR, which consequently leads to decreases in extracellular proteolysis.
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p75NTR interacts with PDE4A4/5 and targets cAMP degradation to the membrane
Recruitment of PDE4 to subcellular structures such as the plasma membrane concentrates the activity of PDEs and reduces PKA activity by enhancing degradation of cAMP (Brunton, 2003; Houslay and Adams, 2003). We therefore examined whether p75NTR regulates cAMP via recruitment of PDE4. In NIH3T3p75NTR cells, p75NTR coimmunoprecipitates (co-IPs) with endogenous PDE4A (Fig. 8 a). No association is observed with the other three PDE4 sub-families, namely PDE4B, PDE4C, or PDE4D (unpublished data), suggesting that the effect was PDE4A specific. Based on the molecular weight of PDE4A at 109 kD, we determined that p75NTR co-IPs with the PDE4A5 isoform. Endogenous co-IP in CGNs (Fig. S3 a, available at http://www.jcb.org/cgi/content/full/jcb.200701040/DC1) and in injured sciatic nerve (Fig S3 b) shows that p75NTR and PDE4A5 interact at endogenous expression levels. Analysis of lysates shows that the levels of PDE4A are similar in NIH3T3 and NIH3T3p75NTR cells (Fig. S3 c). These results show that p75NTR forms a complex with PDE4A5.
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To verify the specificity of p75NTR–PDE4A5 association, a series of mapping studies were conducted using deletion mutants. PDE4A5 interacts with FL p75NTR, as well as deletions
3,
62,
83, but not a deletion missing the distal 151 amino acids,
151 (Fig. 8 c), suggesting that the interaction between p75NTR and PDE4A5 occurs in the juxtamembrane region of p75NTR, requiring sequences between residues 275 and 343. To explain the specificity of the interaction of p75NTR with a single PDE4 isoform, we reasoned that p75NTR would interact with a unique region of PDE4A5 that is not present in other PDE4s. Although the PDE4 isoforms are highly homologous, PDE4A5 contains a unique C-terminal region with a yet unknown biological function (Houslay and Adams, 2003). Co-IP experiments in HEK293 cells using the PDE4A4
CT mutant that is missing the C-terminal region (aa 721–886) abolishes the interaction with p75NTR (Fig. 8 d).
To examine whether p75NTR could interact with PDE4A5 in a direct manner, we performed in vitro pull-down assays using recombinant proteins. A GST fusion protein of p75NTR encoding the entire ICD interacts with both recombinant PDE4A5 and its human homologue PDE4A4 (Fig. 8 e). In contrast, p75NTR ICD does not interact with recombinant PDE4D3 (Fig. 8 e). These results are in accordance with both the endogenous co-IPs in cells (Fig. 8, a and c; Fig. S3) and the PDE4A4 mutagenesis data (Fig. 8 d) because similar to PDE4A4
CT, PDE4D3 does not contain the unique C-terminal domain of PDE4A4/5. We have used peptide array technology to define sites of direct interaction in other PDE4s (Bolger et al., 2006). Screening a peptide array library of overlapping 25-mer peptides that scanned the sequence of PDE4A4 with GST-ICD p75NTR identified interactions with the LR1 domain, whose sequence is unique to the PDE4A subfamily (peptides 40 and 41, aa 191–220), and also to a sequence within the catalytic domain (peptides 135 and 136, aa 671–700). However, the strongest interaction was observed with sequences within the C-terminal region of PDE4A4 (peptides 172 and 173, aa 856–885). Alanine scanning mutagenesis shows that substitution of C862 abolishes the interaction of p75NTR with the 173 peptide that is unique to PDE4A (Fig. 8 g). The p75NTR-interacting sequences within the LR1 and C-terminal domains are highly conserved between the human PDE4A4 and the rodent PDE4A5. Indeed, peptide array screening for PDE4A5 reveals direct interaction with p75NTR similar to that seen for PDE4A4 (unpublished data). Overall, these results suggest that the interaction of p75NTR with PDE4A4/5 is direct and that sequences within the juxtamembrane region of p75NTR and the unique C-terminal region of PDE4A4/5 are primarily required for the interaction (Fig. 8, a, c–g; Fig. S3).
p75NTR regulates plasminogen activation and fibrin deposition in a model of lipopolysaccharide-induced pulmonary fibrosis
Because expression of p75NTR inhibits fibrinolysis in fibroblasts, we hypothesized that the role of p75NTR as a modulator of fibrinolysis extends to tissues outside of the nervous system that express p75NTR after injury or disease. Because p75NTR is expressed in the lung (Ricci et al., 2004), we compared the levels of fibrin in the lung of wt and p75NTR–/– mice in a model of lipopolysaccharide (LPS)-induced lung fibrosis (Chen et al., 2004). LPS-treated wt mice showed widespread extravascular fibrin deposition (Fig. 9 b) and decreased proteolytic activity after LPS treatment (Fig. 9 e), when compared with saline-treated wt mice (Fig. 9, a and d). In contrast, p75NTR–/– mice show a 2.58-fold decrease of fibrin immunoreactivity (Fig. 9, c and j) and increased proteolytic activity (Fig. 9 f).
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| Discussion |
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In spinal cord injury in rodents, elevation of cAMP via the PDE4 inhibitor, rolipram, promotes axonal regeneration and functional recovery (Nikulina et al., 2004). In the sciatic nerve, reduction of cAMP after injury is attributed primarily to up-regulation of PDE4 by SCs (Walikonis and Poduslo, 1998). Based on our findings, it is possible that reexpression of p75NTR after injury could contribute to the activation of PDE4 and down-regulation of cAMP. BDNF, but not NGF, increases cAMP in neurons via TrkB (Gao et al., 2003). Moreover, BDNF/TrkB signaling overcomes the inhibition of nerve regeneration by myelin proteins via inhibition of PDE4 (Gao et al., 2003). We provide the first evidence for p75NTR in the regulation of cAMP by using genetic depletion, siRNA knockdown or up-regulation of the p75NTR. Our results suggest that p75NTR might exert the opposite function as Trk receptors by recruiting PDE4A4/5 and decreasing cAMP. Interestingly, PDE4A has been detected as the predominant PDE4 isoform at the corticospinal tract (Cherry and Davis, 1999). Because p75NTR can act as a coreceptor for NogoR, a mediator of the inhibition of nerve regeneration, PDE4A interaction with p75NTR could play an inhibitory role in nerve regeneration by competing with neurotrophin signaling via Trk receptors.
It is possible that the increased expression of p75NTR by neurons, glia, and brain endothelial cells could regulate the temporal and spatial pattern of tPA expression during brain injury or inflammation. p75NTR might also be upstream of other non-fibrinolytic functions associated with tPA, such as neurodegeneration, synaptic plasticity, and long-term potentiation (Samson and Medcalf, 2006). Given the dependence of p75NTR functions on the availability of ligands and coreceptors (Teng and Hempstead, 2004; Reichardt, 2006), further analysis will determine the role of p75NTR in extracellular proteolysis and ECM remodeling in different cellular systems. We show that expression of p75NTR can inhibit tPA in the absence of neurotrophin ligands. Constitutive expression of p75NTR may signal in a neurotrophin-independent manner to induce neuronal apoptosis (Rabizadeh et al., 1993), activation of Akt (Roux et al., 2001), and RhoGTPase (Yamashita et al., 1999). The regulation of cAMP identified here is an effect of expression of p75NTR that does not appear to depend on neurotrophin signaling. The cellular distribution of PDE4A4/5 would determine the involvement of p75NTR in the regulation of cAMP. It is possible that non-neurotrophin ligands that bind directly to p75NTR, such as ß-amyloid (Teng and Hempstead, 2004), as well as the myelin/NogoR p75NTR–dependent inhibitors of nerve regeneration (Filbin, 2003), are able to regulate both cAMP and plasminogen activation by p75NTR. Because cAMP analogues decrease expression of p75NTR (Baron et al., 1997), it is possible that p75NTR by decreasing cAMP contributes to the positive regulation of its expression. Because PKA phosphorylates p75NTR and regulates its translocation to lipid rafts (Higuchi et al., 2003), p75NTR via regulation of PKA might regulate its own subcellular localization. Given the multiple genes regulated by cAMP and PKA, other cellular functions may be regulated by p75NTR/cAMP signaling.
NGF/p75NTR signaling has been suggested to enhance local neurogenic inflammation to exacerbate pulmonary disease (Renz et al., 2004). Our study suggests an additional pathway for p75NTR as a regulator of expression of PAI-1 and a mediator of fibrosis. p75NTR in the lung is detected mainly in basal epithelial cells of bronchioles (unpublished data). Similar to p75NTR, PAI-1 is expressed by bronchial epithelial cells (Savov et al., 2003) and its expression results in an antifibrinolytic environment within the airway wall. Fibrin regulates both inflammation and airway remodeling (Idell, 2003; Savov et al., 2003). It is therefore possible that p75NTR-mediated regulation of PAI-1 via PDE4 could influence inflammatory and tissue repair processes in pulmonary disease. Although in chronic obstructive pulmonary disease the PDE4A4 isoform is specifically up-regulated (Barber et al., 2004) and considered a pharmacologic target (Houslay et al., 2005), all available inhibitors target the common catalytic domain of all PDE4 isoforms resulting in unwanted side-effects. Our study suggests that the p75NTR/PDE4A4 interaction could be a potential therapeutic target that will achieve the specific inhibition of a single PDE4 isoform and may have therapeutic potential.
Collectively, we have identified a novel cAMP-dependent signaling pathway initiated by p75NTR that specifically regulates plasminogen activity and scar formation after sciatic nerve and lung injury. Though p75NTR is responsible for a variety of cell survival and death decisions (Chao, 2003), our data has revealed an unrecognized property of this receptor to regulate the degradation of cAMP. This property provides a potential mechanism to account for how p75NTR acts at sites of injury to promote ECM remodeling. The impact of high levels of p75NTR expression upon inhibition of extracellular proteolysis indicates that the detrimental effects of p75NTR extend beyond cell growth and axon inhibition. Finally, the dramatic inhibitory effect of p75NTR signaling on plasminogen activation suggests that the p75NTR/PDE4A4 interaction represents a novel target for therapeutic intervention in both neuronal and nonneuronal tissues.
| Materials and methods |
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Immunohistochemistry
Immunohistochemistry was performed as described in Akassoglou et al. (2002). Primary antibodies were sheep anti–human fibrin(ogen) (1:200; US Biologicals), rabbit anti–human tPA (1/300; Molecular Innovations), rabbit anti-p75NTR clone 9651, (1:1,000), goat anti-p75NTR (1/200; Santa Cruz Biotechnology, Inc.), rabbit anti–mouse PAI-1 (1:500; a gift from David Loskutoff, Scripps Research Institute, La Jolla, CA), and mouse anti-S100 (1:200; Neomarkers). For immunofluorescence, secondary antibodies were anti–rabbit FITC and anti–goat Cy3 (1:200; Jackson Immunochemicals). Images were acquired with an Axioplan II epifluorescence microscope (Carl Zeiss MicroImaging, Inc.) using dry Plan-Neofluar lenses using 10x 0.3 NA, 20x 0.5 NA, or 40x 0.75 NA objectives equipped with Axiocam HRc digital camera and the Axiovision image analysis system.
Immunoblot
Immunoblot was performed as described previously (Akassoglou et al., 2002). Antibodies used were rabbit anti-p75NTR clones 9992 and 9651 (1:5,000), mouse anti-fibrin (1:500; Accurate Chemical & Scientific Corp.), rabbit anti-myosin (1:1,000; Sigma-Aldrich), rabbit anti-GAPDH (1:5,000; Abcam) and rabbit anti-PAI-1 (1:5,000; a gift of David Loskutoff). Quantification was performed on the Scion NIH Imaging Software. Fibrin precipitation and quantification from lung tissues was performed exactly as described previously (Ling et al., 2004).
Co-IP
Co-IP was performed as described previously (Khursigara et al., 1999). Cell lysates were prepared in 1% NP-40, 200 mM NaCl, 1 mM EDTA, and 20 mM Tris-HCl, pH 8.0. IP was performed with an anti-p75NTR antibody (9992) and immunoblot with anti-PDE4A, PDE4B, PDE4C, and PDE4D (Fabgennix). The co-IP buffer using NP-40 has been previously used to examine interactions of p75NTR with other intracellular proteins, such as TRAF-6 (Khursigara et al., 1999) and PKA (Higuchi et al., 2003). For mapping experiments, PDE4A5 cDNA was cotransfected with HA-tagged p75NTR deletion constructs into HEK293 cells. IP was performed with an anti-HA antibody (Cell Signaling). Cell lysates were probed with an anti-PDE4A or an anti-p75NTR antibody (9651). For co-IP experiments using recombinant proteins, equimolar amounts (2 µM) of purified recombinant MBP-PDE4A5 (O'Connell et al., 1996), MPB-PDE4A4 (McPhee et al., 1999), MBP-PDE4D3 (Yarwood et al., 1999), and GST-p75NTR-ICD (Khursigara et al., 2001) were mixed in binding buffer (50 mM Tris-HCl, pH 7.5, 100 mM NaCl, 2 mM MgCl2, 1 mM DTT, 0.5% Triton X-100, and 0.5% BSA) and incubated for 1 h at 4°C. Washed glutathione-Sepharose beads were added according to the manufacturer's instructions for an additional hour. Beads were sedimented by centrifugation (10,000 g for 1 min) and washed three times. Proteins associated with the beads were eluted by boiling in loading buffer and separated by SDS-PAGE.
RT-PCR and real-time PCR
RT-PCR was performed as described previously (Akassoglou et al., 2002). Primers for tPA, uPA, and PAI-1 genes were used as described previously (Yamamoto and Loskutoff, 1996). Real-time PCR was performed using the Opticon DNA Engine 2 (MJ Research) and the Quantitect SYBR Green PCR kit (QIAGEN). Results were analyzed with Opticon 2 software using the comparative Ct method as described previously (Livak and Schmittgen, 2001). Data were expressed as 
Ct for the tPA gene normalized against GAPDH.
Quantification of tPA and uPA activity
Quantification of tPA and uPA activity in SC and fibroblast in lysates and supernatants was performed according to the directions of the activity assay kits from American Diagnostica and Chemicon, respectively. To elevate cAMP cells were treated either with 2 mM db-cAMP (Sigma-Aldrich) or with 10 µM forskolin (Sigma-Aldrich) for 16 h. To block PKA activity, cells were treated with 200 nM KT5720 (Calbiochem). Induction with neurotrophins was performed using 100 ng/ml NGF and 50 ng/ml BDNF for 16 h before tPA assay.
Fibrin degradation assay
Coating with fibrin was prepared as described previously (Lansink et al., 1998). To quantitate fibrin degradation, the supernatant was aspirated and the remaining gel was weighed using an analytical balance. Decrease of gel weight corresponded to increased fibrin gel degradation.
Cell culture and transfections
Murine SCs were isolated as described previously (Syroid et al., 2000). NIH3T3 or HEK293 cells were cotransfected either with p75NTR FL, ICD or deletion constructs, and PDE4A5 cDNAs using Lipofectamine 2000 (Invitrogen) as described in the Results section. CGNs were isolated from P10 animals (Yamashita and Tohyama, 2003). CGNs were lysed immediately for co-IP, without plating. siRNA directed against p75NTR (Dharmacon) was transfected into SCs and NIH3T3p75NTR cells using Dharmafect (Dharmacon).
cAMP/PKA assays
106 fibroblasts or 500,000 SCs were lysed in 0.1 N HCl solution and cAMP was measured using a competitive binding cAMP ELISA (Assay Designs). Cells were treated with 100 ng/ml PTX for 16 h. For inhibition of PDE activity, cells were treated for 16 h with 500 µM isobutyl methylxanthine (IBMX; Calbiochem), 18.7 µM 8-methoxymethyl-3-isobutyl-1-methylxanthine (PDE1 inhibitor; Calbiochem), 80 µM erythro-9-(2-Hydroxy-3-nonyl)adenine (PDE2 inhibitor; Calbiochem), 100 nM trequinsin (PDE3 inhibitor; Calbiochem), and 10 µM rolipram (PDE4 inhibitor; Calbiochem). Cells were treated with forskolin in the presence of the inhibitors for 1 h. Because these inhibitors specifically inhibit a PDE isoform and have no effect on the other PDE isoenzymes (Beavo and Reifsnyder, 1990), they are extensively used for the identification of the specific PDE isoform that is involved in different cellular functions. Induction with neurotrophins was performed using 100 ng/ml NGF or 50 ng/ml BDNF, 750 ng/ml of FcTrkB, or 1.35 ug/ml of Fcp75NTR for 1 h before cAMP assay. For the qualitative and quantitative PKA assay (Promega), cells were treated with 10 µM forskolin for 30 min, lysed in 1% NP-40 buffer with 150 mM NaCl, 50 mM Tris, and 1 mM EGTA, and protein concentration was determined using the Bradford Assay (Bio- Rad Laboratories). 1 µg was loaded into the PKA assay reaction mix according to the manufacturer's protocol (Promega).
In situ zymography
In situ zymographies were performed as described previously (Akassoglou et al., 2000). Quantification of in situ zymographies was performed by measuring the area of the lytic zone surrounding each nerve, and dividing that value by the area of the nerve. Images were collected after 8 h of incubation for the sciatic nerve and 4 h of incubation for the lung. For cell zymographies, cultures were washed four times with PBS/BSA and overlaid with 200 µl of Dulbecco's minimum essential medium containing 1% LMP agarose, 2.5% boiled nonfat milk, and 25 µg/ml human plasminogen. The overlay was allowed to harden, and plates were incubated in a cell culture incubator at 37°C. Pictures of lytic zones were taken using an inverted microscope under dark field (Carl Zeiss MicroImaging, Inc.).
Construction of pm-AKAR2.2 and PDE4A4
CT
For the construction of pm-AKAR2.2 we used the previously described cytoplasmic PKA sensor, AKAR2 (Zhang et al., 2005). pm-AKAR2.2 consists of a cDNA containing a FRET pair, monomeric enhanced cyan fluorescent protein (ECFP), and monomeric citrine (an optimized version of YFP), fused to forkhead associated domain 1 (FHA1) (Rad53p 22–162), and the PKA substrate sequence LRRATLVD via linkers. A206K mutations were incorporated to ECFP and Citrine by the QuikChange method (Stratagene). The C-terminal sequence from K-Ras KKKKKKSKTKCVIM was added to target the construct to the plasma membrane. For expression in mammalian cells, the chimaeric proteins were subcloned into a modified pcDNA3 vector (Invitrogen) behind a Kozak sequence as described previously (Zhang et al., 2005).
For the generation of the PDE4A4
CT, PDE4A4 was subcloned into p3XFLAG-CMV-14 using plasmid pde46 (GenBank/EMBL/DDBJ accession no. L20965) as template from Met-1 to Iso-721 (McPhee et al., 1999). A forward (5') primer containing a HindIII restriction site immediately 5' to the initiating Met-1 (ATG) of PDE4A4 and a reverse primer designed to the DNA sequence ending at Iso-721 (ATA) with BamHI restriction site immediately 3' to Iso-721 was used to amplify Met-1 to Iso-721. The C terminus was removed simply by amplifying from Iso-721 instead of the final codon at the end of the full-length PDE4A4B. The C-terminally truncated PDE4A4B was cloned in-frame with three FLAG (Asp-Tyr-Lys-Xaa-Xaa-Asp) epitopes (Asp-726, Asp-733 & Asp-740) after the BamHI restriction site, therefore at the C terminus of the now-truncated PDE4A4. The stop codon (TAG) after the FLAG epitopes is located immediately after Lys-747. This strategy generates a C-terminal truncate of PDE4A4 from 1–721.
FRET imaging
NIH3T3 cells and NIH3T3p75NTR cells were transiently transfected with pm-AKAR2.2, AKAR3, or pm-AKAR3 (Allen and Zhang, 2006) and imaged within 24 h of transfection. Cells were rinsed once with HBSS (Cellgro) before imaging in HBSS in the dark at room temperature. An Axiovert microscope (Carl Zeiss Microimaging, Inc.) with a MicroMax digital camera (Roper-Princeton Instruments) and MetaFluor software (Universal Imaging Corp.) was used to acquire all images. Optical filters were obtained from Chroma Technologies. CFP and FRET images were taken at 15-s intervals. Dual emission ratio imaging used a 420/20-nm excitation filter, a 450-nm dichroic mirror and a 475/40-nm or 535/25-nm emission filter for CFP and FRET, respectively. Excitation and emission filters were switched in filter wheels (Lambda 10–2; Sutter Instrument Co.).
Peptide array mapping
Peptide libraries were synthesized by automatic SPOT synthesis (Frank, 2002). Synthetic overlapping peptides (25 amino acids in length) were spotted on Whatman 50 cellulose membranes according to standard protocols by using Fmoc-chemistry with the AutoSpot Robot ASS 222 (Intavis Bioanalytical Instruments AG). Membranes were overlaid with 10 µg/ml recombinant GST-p75NTR ICD. Bound recombinant GST-p75NTR ICD (Khursigara et al., 2001) was detected using rabbit anti-GST (1:2,000; GE Healthcare) followed by secondary anti–rabbit horseradish peroxidase antibody (1:2,500; Dianova). Alanine scanning was performed as described previously (Bolger et al., 2006).
Statistics
Statistical significance was calculated using JMP2 Software by unpaired t test for isolated pairs or by analysis of variance (one-way ANOVA) for multiple comparisons. Data are shown as the mean ± SEM.
Online supplemental material
Fig. S1 shows that genetic loss of p75NTR increases tPA mRNA levels and proteolytic activity in the cerebellum. Fig. S2 demonstrates that treatment with neurotrophins has no effect on cAMP levels in NIH3T3 cells. Fig. S3 shows endogenous coimmunoprecipitations of PDE4A5 and p75NTR from injured sciatic nerve and from primary CGNs. Fig. S4 shows results from transient transfections of NIH3T3 cells with p75NTR and the PKA activity reporters, AKAR3 and pm-AKAR3. Fig. S5 shows that inhibition of PDE4s with rolipram decreases fibrin deposition both in LPS-induced lung fibrosis and sciatic nerve crush injury. The online version of this article is available at http://www.jcb.org/cgi/content/full/jcb.200701040/DC1.
| Acknowledgments |
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Supported in part by the Pharmacology National Institutes of Health (NIH) training grant 5T32-GM07752 to B.D. Sachs and M.A. Passino, the DFG postdoctoral fellowship to C. Schachtrup, and the ASPET fellowship to J.R. McCall. The Alliance for Cell Signaling and NIH grant NS27177 to Roger Y. Tsien supported J. Zhang. This work was supported by NIH grants NS21072 and HD23315 to M.V. Chao; and NIH grants NS51470 and NS52189 to K. Akassoglou.
This work is dedicated to the memory of our parents Beatrice Du Chao, Evangelia Akassoglou, and Douglas Houslay, who passed away during the preparation of this manuscript.
Submitted: 8 January 2007
Accepted: 21 May 2007
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